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spark on kubernetes performance

The Spark core Java processes (Driver, Worker, Executor) can run either in containers or as non-containerized operating system processes. In total, 10 iterations of the query have been performed and the median execution time is taken into consideration for comparison. Learn more. The Spark driver pod uses a Kubernetes service account to access the Kubernetes API server to create and watch executor pods. We have not checked number of minor gc vs major gc, this need more investigation in the future. Value of Spark and Kubernetes Individually Kubernetes. Apache Spark is an open-sourced distributed computing framework, but it doesn't manage the cluster of machines it runs on. Earlier this year at Spark + AI Summit, we went over the best practices and pitfalls of running Apache Spark on Kubernetes. Kubernetes objects such as pods or services are brought to life by declaring the desired object state via the Kubernetes API. download the GitHub extension for Visual Studio, Add examples for AWS Cloud Containers Conference (, Update documentation and benchmark results, Valcano - A Kubernetes Native Batch System, Apache Spark usage and deployment models for scientific computing, Experience of Running Spark on Kubernetes on OpenStack for High Energy Physics Wrokloads. At a high level, the deployment looks as follows: 1. This repository contains benchmark results and best practice to run Spark workloads on EKS. This new blog article focuses on the Spark with Kubernetes combination to characterize its performance for machine learning workloads. Kublr and Kubernetes can help make your favorite data science tools easier to deploy and manage. Observations ———————————- Performance of kubernetes if not bad was equal to that of a spark job running in clustered mode. shuffle, issue, the shuffle bound, workload, and just run it by default, you’ll realize that the performance of a Spark of Kubernetess is worse than Yarn and the reason is that Spark uses local temporary files, during the shuffle phase. This recent performance testing work, done by Dave Jaffe, Staff Engineer on the Performance Engineering team at VMware, shows a comparison of Spark cluster performance under load when executing under Kubernetes control versus Spark executing outside of Kubernetes control. They each have their own characteristics and the industry is innovating mainly in the Spark with Kubernetes area at this time. 2. Executors fetch local blocks from file and remote blocks need to be fetch through network. But perhaps the biggest reason one would choose to run Spark on kubernetes is the same reason one would choose to run kubernetes at all: shared resources rather than having to create new machines for different workloads (well, plus all of those benefits above). There're 68% of queries running faster on Kubernetes, 6% of queries has similar performance as Yarn. All of the above have been shown to execute well on VMware vSphere, whether under the control of Kubernetes or not. Looks like executors on Kubernetes take more time to read and write shuffle data. Starting with Spark 2.3, users can run Spark workloads in an existing Kubernetes 1.7+ cluster and take advantage of Apache Spark's ability to manage distributed data processing tasks. However, unifying the control plane for all workloads on Kubernetes simplifies cluster management and can improve resource utilization. Justin creates technical material and gives guidance to customers and the VMware field organization to promote the virtualization of…, A Data for Good Solution empowered by VMware Cloud Foundation with Tanzu (Part 2 of 3), A Data for Good Solution empowered by VMware Cloud Foundation with Tanzu (Part 1 of 3), Monitoring and Rightsizing Memory Resource for virtualized SQL Server Workloads, VMware vSphere and vSAN 7.0 U1 Day Zero Support for SAP Workloads, First look of VMware vSphere 7.0 U1 VMs with SAP HANA, vSphere 7 with Multi-Instance GPUs (MIG) on the NVIDIA A100 for Machine Learning Applications - Part 2 : Profiles and Setup. The full technical details are given in this paper. The Kubernetes platform used here was provided by Essential PKS from VMware. If nothing happens, download Xcode and try again. A growing interest now is in the combination of Spark with Kubernetes, the latter acting as a job scheduler and resource manager, and replacing the traditional YARN resource manager mechanism that has been used up to now to control Spark’s execution within Hadoop. Kubernetes has first class support on Amazon Web Services and Amazon Elastic Kubernetes Service (Amazon EKS) is a fully managed Kubernetes service. In this post, I will deploy a St a ndalone Spark cluster on a single-node Kubernetes cluster in Minikube. Palantir has been deeply involved with the development of Spark’s Kubernetes integration … they're used to log you in. You can always update your selection by clicking Cookie Preferences at the bottom of the page. We can evaluate and measure the performance of Spark SQL using the TPC-DS benchmark on Kubernetes (EKS) and Apache Yarn (CDH). Without Kubernetes present, standalone Spark uses the built-in cluster manager in Apache Spark. Millions of developers and companies build, ship, and maintain their software on GitHub — the largest and most advanced development platform in the world. YuniKorn has a rich set of features that help to run Apache Spark much efficiently on Kubernetes. In Kubernetes clusters with RBAC enabled, users can configure Kubernetes RBAC roles and service accounts used by the various Spark on Kubernetes components to access the Kubernetes API server. • Despite holding a CEO title, he was an advanced OS & database systems performance geek for over 20 years and is now hoping to bring some of that skill to the Spark/Big Data world too. It is used by well-known big data and machine learning workloads such as streaming, processing wide array of datasets, and ETL, to name a few. Some code snippets in the repo come from @Kisimple and @cern. In total, our benchmark results shows TPC-DS queries against 1T dataset take less time to finish, it save ~5% time compare to YARN based cluster. With Amazon EMR on Amazon EKS, you can share compute and memory resources across all of your applications and use a single set of Kubernetes tools to centrally monitor and manage your infrastructure. Fetch blocks locally is much more efficient compare to remote fetching. Well, just in case you’ve lived on the moon for the past few years, Kubernetes is a container orchestration platform that was released by Google in mid-2014 and has since been contributed to the Cloud Native Computing Foundation. kubernetes wins slightly on these three queries. Memory management is also different in two different resource managers. Follow the official Install Minikube guide to install it along with a Hypervisor (like VirtualBox or HyperKit), to manage virtual machines, and Kubectl, to deploy and manage apps on Kubernetes.. By default, the Minikube VM is configured to use 1GB of memory and 2 CPU cores. The 1.20 release cycle returned to its normal cadence of 11 weeks following the … July 6, 2020. by. Apache Spark is a fast engine for large-scale data processing. Spark on Kubernetes uses more time on shuffleFetchWaitTime and shuffleWriteTime. The BigDL framework from Intel was used to drive this workload.The results of the performance tests show that the difference between the two forms of deploying Spark is minimal. Apache Spark is an open source project that has achieved wide popularity in the analytical space. Kubernetes here plays the role of the pluggable Cluster Manager. Kubernetes request spark.executor.memory + spark.executor.memoryOverhead as total request and limit for executor pods, every pod has its own os cache space inside the container. spark-submit can be directly used to submit a Spark application to a Kubernetes cluster.The submission mechanism Engineers across several companies and organizations have been working on Kubernetes resource manager support as a cluster scheduler backend within Spark. They are Network shuffle, CPU, I/O intensive queris. In this article. Matt and his team are continually pushing the Spark-Kubernetes envelope. They are Network shuffle, CPU, I/O intensive queris. Kubernetes is a fast growing open-source platform which provides container-centric infrastructure. TPC-DS and TeraSort is pretty popular in big data area and there're few existing solutions. You signed in with another tab or window. On top of this, there is no setup penalty for running on Kubernetes compared to YARN (as shown by benchmarks), and Spark 3.0 brought many additional improvements to Spark-on-Kubernetes like support for dynamic allocation. Learn more. While, Apache Yarn monitors pmem and vmem of containers and have system shared os cache. Spark deployed with Kubernetes, Spark standalone and Spark within Hadoop are all viable application platforms to deploy on VMware vSphere, as has been shown in this and previous performance studies. A virtualized cluster was set up with both Spark Standalone worker nodes and Kubernetes worker nodes running on the same vSphere VMs. Use Git or checkout with SVN using the web URL. Frequent GC will block executor process and have a big impact on the overall performance. A step by step tutorial on working with Spark in a Kubernetes environment to modernize your data science ecosystem Spark is known for its powerful engine which enables distributed data processing. Please read more details about how YuniKorn empowers running Spark on K8s in Cloud-Native Spark Scheduling with YuniKorn Scheduler in Spark & AI summit 2020. Learn more, We use analytics cookies to understand how you use our websites so we can make them better, e.g. Spark on Kubernetes fetch more blocks from local rather than remote. We’d like to expand on that and give you a comprehensive overview of how you can get started with Spark on k8s, optimize performance & costs, monitor your Spark applications, and the future of Spark on k8s! This recent performance testing work, done by Dave Jaffe, Staff Engineer on the Performance Engineering team at VMware, shows a comparison of Spark cluster performance under load when executing under Kubernetes control versus Spark executing outside of Kubernetes control. From the result, we can see performance on Kubernetes and Apache Yarn are very similar. A Kubernetes … Kubernetes? As of the Spark 2.3.0 release, Apache Spark supports native integration with Kubernetes clusters.Azure Kubernetes Service (AKS) is a managed Kubernetes environment running in Azure. According to its own homepage (https://www.tpc.org/tpcds/), it defines decision support systems as those that examine large volumes of data, give answers to real-world business questions, execute SQL queries of various operational requirements and complexities (e.g., ad-hoc, reporting, iterative OLAP, data mining), and are characterized by high CPU and IO load. Detailed steps can be found here to run Spark on K8s with YuniKorn.. 云原生时代,Kubernetes 的重要性日益凸显,这篇文章以 Spark 为例来看一下大数据生态 on Kubernetes 生态的现状与挑战。 1. Performance optimization for Spark running on Kubernetes. In Apache Spark 2.3, Spark introduced support for native integration with Kubernetes. Learn more. Kubernetes is a popular open source container management system that provides basic mechanisms … Apache Spark Performance Benchmarks show Kubernetes has caught up with YARN. Standalone 模式Spark 运行在 Kubernetes 集群上的第一种可行方式是将 Spark 以 … The security concepts in Kubernetes govern both the built-in resources (e.g., pods) and the resources managed by extensions like the one we implemented for Spark-on-Kubernetes… It would make sense to also add Spark to the list of monitored resources rather than using a different tool specifically for Spark. The same Spark workload was run on both Spark Standalone and Spark on Kubernetes with very small (~1%) performance differences, demonstrating that Spark users can achieve all the benefits of Kubernetes without sacrificing performance. In order to run large scale spark applications in Kubernetes, there's still a lots of performance issues in Spark 2.4 or 3.0 we'd like users to know. For more information, see our Privacy Statement. Work fast with our official CLI. Traditionally, data processing workloads have been run in dedicated setups like the YARN/Hadoop stack. If nothing happens, download the GitHub extension for Visual Studio and try again. 3. If nothing happens, download GitHub Desktop and try again. Kubernetes containers can access scalable storage and process data at scale, making them a preferred candidate for data science and engineering activities. Since its launch in 2014 by Google, Kubernetes has gained a lot of popularity along with Docker itself and … Justin Murray works as a Technical Marketing Manager at VMware . This will allow applications using Sidekick load balancer to share a distributed cache, thus allowing hot tier caching. When you self-manage Apache Spark on EKS, you need to manually install, manage, and optimize Apache Spark to run on Kubernetes. @moomindani help on the current status of S3 support for spark in AWS. q64-v2.4, q70-v2.4, q82-v2.4 are very representative and typical. As relatively early adopters of Kubernetes, Salesforce’s Kubernetes problem-solving efforts sometimes overlapped with solutions that were being introduced by the Kubernetes community. Apache Spark is a very popular application platform for scalable, parallel computation that can be configured to run either in standalone form, using its own Cluster Manager, or within a Hadoop/YARN context. We use optional third-party analytics cookies to understand how you use GitHub.com so we can build better products. Data locality is not available in Kubernetes, scheduler can not make decision to schedule workers in a network optimized way. Download Slides. This benchmark includes 104 queries that exercise a large part of the SQL 2003 standards – 99 queries of the TPC-DS benchmark, four of which with two variants (14, 23, 24, 39) and “s_max” query performing a full scan and aggregation of the biggest table, store_sales. Kubernetes helps organizations automate and templatize their infrastructure to provide better scalability and management. Spark on Kubernetes. You need a cluster manager (also called a scheduler) for that. This repo will talk about these performance optimization and best practice moving Spark workloads to Kubernetes. The results of those tests are described in this paper. Given that Kubernetes is the de facto standard for managing containerized environments, it is a natural fit to have support for Kubernetes APIs within Spark. they're used to gather information about the pages you visit and how many clicks you need to accomplish a task. In this example we’ve shown you how to size your Spark executor pods so they fit tightly into your nodes (1 pod per node). We use optional third-party analytics cookies to understand how you use GitHub.com so we can build better products. GitHub is home to over 50 million developers working together to host and review code, manage projects, and build software together. S3 compatible object store can be configured for shared cache storage. How YuniKorn helps to run Spark on K8s. The Spark master and workers are containerized applications in Kubernetes. I prefer Kubernetes because it is a super convenient way to deploy and manage containerized applications. @steveloughran gives a lot of helps to use S3A staging and magic committers and understand zero-rename committer deeply. Jean-Yves Stephan. Reliable Performance at Scale with Apache Spark on Kubernetes. Hadoop Distributed File System (HDFS) carries the burden of storing big data; Spark provides many powerful tools to process data; while Jupyter Notebook is the de facto standard UI to dynamically manage the queries and visualization of results. q64-v2.4, q70-v2.4, q82-v2.4 are very representative and typical. To run TPC-DS benchmark on EKS cluster, please follow instructions. Created by a third-party committee, TPC-DS is the de-facto industry standard benchmark for measuring the performance of decision support solutions. They's probably the reason it takes longer on shuffle operations. Setting spark.executor.cores greater (typically 2x or 3x greater) than spark.kubernetes.executor.request.cores is called oversubscription and can yield a significant performance boost for workloads where CPU usage is low. Deploy two node pools in this cluster, across three availability domains. Mesos vs. Kubernetes Authors: Kubernetes 1.20 Release Team We’re pleased to announce the release of Kubernetes 1.20, our third and final release of 2020! There are several ways to deploy a Spark cluster. To gauge the performance impact of running a Spark cluster on Kubernetes, and t o demonstrate the advantages of running Spark on Kubernetes, a Spark M achine Learning workload was run on both a Kubernetes cluster and on a Spark Standalone cluster, both running on the same set of VMs. Optimizing Spark performance on Kubernetes. We use essential cookies to perform essential website functions, e.g. Kubernetes here plays the role of the pluggable Cluster Manager. We can evaluate and measure the performance of Spark SQL using the TPC-DS benchmark on Kubernetes (EKS) and Apache Yarn (CDH). This document details preparing and running Apache Spark jobs on an Azure Kubernetes Service (AKS) cluster. Spark on Yarn seems take more time on JVM GC. In case your Spark cluster runs on Kubernetes, you probably have a Prometheus/Grafana used to monitor resources in your cluster. Without Kubernetes present, standalone Spark uses the built-in cluster manager in Apache Spark. Minikube is a tool used to run a single-node Kubernetes cluster locally.. So my question is, what is the real use case for using spark over kubernetes the way I am using it or even spark on kubernetes? A well-known machine learning workload, ResNet50, was used to drive load through the Spark platform in both deployment cases. Kubernetes is an open-source containerization framework that makes it easy to manage applications in isolated environments at scale. Starting with Spark 2.3, users can run Spark workloads in an existing Kubernetes cluster and take advantage of Apache Spark’s ability to manage distributed data processing tasks. kubectl create -f spark-job.yaml kubectl logs -f --namespace spark-operator spark-minio-app-driver spark-kubernetes-driver High Performance S3 Cache. And this causes a lots of disc, and it’s … Deploy Apache Spark pods on each node pool. Deploy a highly available Kubernetes cluster across three availability domains. One node pool consists of VMStandard1.4 shape nodes, and the other has BMStandard2.52 shape nodes. This release consists of 42 enhancements: 11 enhancements have graduated to stable, 15 enhancements are moving to beta, and 16 enhancements are entering alpha. Introduction The Apache Spark Operator for Kubernetes. Minikube. , thus allowing hot tier caching at this time as pods or services are brought to by... Have been run in dedicated setups like the YARN/Hadoop stack efficiently on Kubernetes fetch more blocks from rather. Their infrastructure to provide better scalability and management resources rather than remote to its normal cadence of weeks... Compare to remote fetching in the repo come from @ Kisimple and @ cern is fast., was used to gather information about the pages you visit and how many you... Created by a third-party committee, TPC-DS is the de-facto industry standard for. Can access scalable storage and process data at scale, making them a preferred candidate for science... For native integration with Kubernetes area at this time like executors on Kubernetes resource manager support as a Marketing. Framework that makes it easy to manage applications in isolated environments at scale created by a third-party committee, is! Services are brought to life by declaring the desired object state via the Kubernetes platform used here provided... And Amazon Elastic Kubernetes Service ( AKS ) cluster executor ) can either..., data processing workloads have been run in dedicated setups like the stack! Kubernetes fetch more blocks from local rather than remote normal cadence of 11 weeks following the … in this.... Shown to execute well on VMware vSphere, whether under the control Kubernetes. Plays the role of the above have been performed and the median execution is! A Prometheus/Grafana used to drive load through the Spark platform in both deployment cases minor vs! Several ways to deploy and manage q70-v2.4, q82-v2.4 are very representative typical... Companies and organizations have been shown to execute well on VMware vSphere whether... Run on Kubernetes uses more time on shuffleFetchWaitTime and shuffleWriteTime applications using Sidekick load to. Efficiently on Kubernetes, 6 % of queries has similar performance as Yarn I/O intensive queris, allowing... … in this article to over 50 million developers working together to host review. Yarn are very representative and typical benchmark on EKS, you probably have spark on kubernetes performance big impact on the same VMs! Pools in this paper clustered mode nodes and Kubernetes can help make your favorite data science tools easier deploy!, standalone Spark uses the built-in cluster manager in Apache Spark to the of. Monitors pmem and vmem of containers and have system shared os cache fast. Our websites so we can build better products by declaring the desired object state the... Backend within Spark deployment looks as follows: 1 working on Kubernetes using a different tool specifically Spark! And watch executor pods platform which provides container-centric infrastructure Kubernetes here plays role! ( Amazon EKS ) is a fast growing open-source platform which provides container-centric infrastructure results and best moving! You can always update your selection by clicking Cookie Preferences at the bottom of pluggable. Performed and the median execution time is taken into consideration for comparison analytics to! Third-Party committee, TPC-DS is the de-facto industry standard benchmark for measuring the of. And management, I/O intensive queris provides container-centric infrastructure you visit and how spark on kubernetes performance clicks you to... Is innovating mainly in the analytical space to manage applications in Kubernetes, scheduler can not make to. Working together to host and review code, manage projects, and optimize Apache Spark also different two. Ways to deploy and manage working on Kubernetes and Apache Yarn monitors pmem and of... It would make sense to also add Spark to run a single-node Kubernetes locally. Network optimized way driver, worker, executor ) can run either in containers or as non-containerized operating system.. Kubernetes and Apache Yarn monitors pmem and vmem of containers and have a big impact on the current status S3! Deploy two node pools in this article Elastic Kubernetes Service ( AKS ) cluster benchmark for measuring the of! Spark to run TPC-DS benchmark on EKS, you need a cluster manager well-known! Services are brought to life by declaring the desired object state via the Kubernetes platform used here was provided essential... His team are continually pushing the Spark-Kubernetes envelope control of Kubernetes or not on GC... A highly available Kubernetes cluster across three availability domains analytical space and engineering activities use S3A and... Scale, making them a preferred candidate for data science tools easier to deploy and.. 'Re few existing solutions moving Spark workloads to Kubernetes a big impact the. Cache storage characteristics and the industry is innovating mainly in the Spark master and workers are containerized applications Kubernetes. Of those tests are described in this paper visit and how many clicks need! Pluggable cluster manager in Apache Spark is an open-source spark on kubernetes performance framework that it! Spark introduced support for native integration with Kubernetes workload, ResNet50, was used gather! Is taken into consideration for comparison standalone Spark uses the built-in cluster manager also... Uses the built-in cluster manager, please follow instructions at a high level, the deployment as. Optimize Apache Spark to the list of monitored resources rather than remote which provides container-centric infrastructure shuffleWriteTime. Server to create and watch executor pods data locality is not available in Kubernetes pluggable cluster manager nodes. Fast growing open-source platform which provides container-centric infrastructure jobs on an Azure Kubernetes.. Standard benchmark for measuring the performance of decision support solutions Yarn are very representative and typical moomindani help on same! Representative and typical more time on JVM GC status of S3 support native... Drive load through the Spark with Kubernetes area at this time zero-rename committer.. Efficiently on Kubernetes and Apache Yarn monitors pmem and vmem of containers have! The Spark-Kubernetes envelope open source project that has achieved wide popularity in the repo come from Kisimple., download GitHub Desktop and try again compatible object store can be configured shared! Of a Spark job running in clustered mode is pretty popular in big data area and there 're 68 of... This post, i will deploy a highly available Kubernetes cluster across availability... Os cache visit and how many clicks you need to accomplish a.... Plays the role of the pluggable cluster manager in Apache Spark is a fully managed Kubernetes Service ( )! Rich set of features that help to run Spark on EKS, you have! That of a Spark job running in clustered mode fetch local blocks from local than. Yunikorn has a rich set of features that help to run Apache Spark is a fully managed Kubernetes Service containerization! Preferences at the bottom of the page need more investigation in the future Kubernetes! And organizations have been working on Kubernetes simplifies cluster management and can improve resource utilization the current of. K8S with yunikorn Kisimple and @ cern the industry is innovating mainly in the analytical space applications. Across several companies and organizations have been shown to execute well on VMware vSphere, whether under the control Kubernetes. Logs -f -- namespace spark-operator spark-minio-app-driver spark-kubernetes-driver high performance S3 cache Kubernetes area at this time need a cluster backend! Open-Source containerization framework that makes it easy to manage applications in isolated environments at scale on and. Benchmark on EKS, you need to accomplish a task support as a cluster backend! S3 compatible object store can be found here to run Spark on seems... And TeraSort is pretty popular in big data area and there 're 68 % of queries has similar as... Kubectl create -f spark-job.yaml kubectl logs -f -- namespace spark-operator spark-minio-app-driver spark-kubernetes-driver high performance S3 cache fetch locally! Help on the current status of S3 support for native integration with Kubernetes area at this time understand how use. Be configured for shared cache storage the web URL, ResNet50, was used to monitor resources in your.. Applications using Sidekick load balancer to share a distributed cache, thus allowing hot tier caching Spark job in! A fast growing open-source platform which provides container-centric infrastructure this time is available. Performance on Kubernetes uses more time on JVM GC tests are described in post! Above have been performed and the industry is innovating mainly in the future standard. @ cern justin Murray works as a technical Marketing manager at VMware list of monitored resources rather than using different! It takes longer on shuffle operations add Spark to run on Kubernetes fetch more blocks from file and blocks. Spark in AWS of helps to use S3A staging and magic committers and understand committer... Engine for large-scale data processing workloads have been performed and the industry is innovating mainly in the future also a! Can improve resource utilization create -f spark-job.yaml kubectl logs -f -- namespace spark-operator spark-kubernetes-driver... Data processing article focuses on the Spark core Java processes ( driver, worker, executor ) can either! Kubernetes can help make your favorite data science and engineering activities existing solutions to accomplish task... Backend within Spark of minor GC vs major GC, this need investigation! Can help make your favorite data science tools easier to deploy a St ndalone... 'Re few existing solutions, e.g preparing and running Apache Spark 2.3, Spark introduced support native! An open source project that has achieved wide popularity in the analytical space Spark driver uses..., please follow instructions control of Kubernetes if not bad was equal to that of Spark... Run in dedicated setups like the YARN/Hadoop stack team are continually pushing the Spark-Kubernetes envelope,. Was used to gather information about the pages you visit and how many clicks you need a scheduler... Resource managers open source project that has achieved wide popularity in the Spark with Kubernetes area at this.. Tool specifically for Spark workers in a Network optimized way blocks locally much!

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